How to Disinfect Shoes from Fungus: A Complete Guide to a Fresh Start
That persistent, unpleasant odor emanating from your favorite shoes is more than just a nuisance—it’s often a sign of a fungal infestation. Fungus in shoes, including the types that cause athlete’s foot and toenail fungus, thrives in dark, damp environments. Learning how to disinfect shoes from fungus is crucial not only for eliminating foul smells but also for preventing reinfection and protecting your foot health.
This comprehensive guide will walk you through the most effective methods to kill fungus in your shoes, ensuring your footwear is clean, fresh, and safe.
Why is it Important to Disinfect Shoes from Fungus?
Simply treating your feet for a fungal infection isn’t enough. If you don’t disinfect your shoes, you’re likely to re-infect yourself immediately. Fungal spores can survive inside footwear for long periods, turning your shoes into a reservoir for repeat problems.
Dr. Sarah Miller, a practicing podiatrist, emphasizes, “Many patients successfully treat the fungal infection on their skin or nails, only to have it return because they neglected the environmental source—their shoes. Consistent shoe disinfection is a non-negotiable part of the treatment protocol.”
Top Methods to Disinfect and Kill Shoe Fungus
Here are the most effective, tried-and-tested methods to eradicate fungus from your footwear.
1. Sunlight and Fresh Air: The Natural Remedy
This is the simplest and most cost-effective method. Ultraviolet (UV) rays from the sun are a natural disinfectant that can kill fungal spores.
- How to do it: Remove the insoles and laces. Place the shoes in direct sunlight for several hours, ideally on a dry, sunny day. The heat will help dry out moisture while the UV rays work to disinfect.
- Best for: Routine maintenance and mild odors. Not suitable for delicate materials that can fade.

2. Disinfectant Sprays and Rubbing Alcohol
Liquid disinfectants are excellent for targeting the interior surfaces where fungus lives.
- How to do it:
- Rubbing Alcohol: Fill a spray bottle with 70% isopropyl alcohol. Spray the entire interior of the shoe, focusing on the insole and toe box. Let it air dry completely.
- Antifungal Spray: Use an over-the-counter antifungal spray or cream designed for shoes. Apply as directed on the label.
- Best for: Quick, regular disinfection, especially after workouts.
3. The Power of Baking Soda and Antifungal Powders
Baking soda (sodium bicarbonate) is a mild antifungal agent and a fantastic deodorizer. Antifungal powders containing ingredients like Miconazole or Tolnaftate are more targeted.
- How to do it: Sprinkle a generous amount of baking soda or medicated antifungal powder inside the shoes. Let it sit overnight, then shake it out thoroughly.
- Best for: Daily odor control and moisture absorption between deeper cleanings.
4. Freezing: The Cold Kill Method
Extreme cold can be just as effective as heat in killing microorganisms, including fungal spores.
- How to do it: Seal your shoes in a plastic zip-top bag and place them in the freezer for at least 24-48 hours. The prolonged cold temperature will kill most fungal spores.
- Best for: Shoes that can’t be washed or exposed to liquids. A good alternative, though less studied than other methods.
5. UV Shoe Sanitizers: The Tech-Driven Solution
UV shoe sanitizers are specialized devices that use UV-C light, a type of light known for its germicidal properties, to kill bacteria and fungus.
- How to do it: Insert the device into each shoe and turn it on. A typical cycle runs for 20-45 minutes.
- Best for: Individuals with recurring fungal issues or those looking for a hands-off, chemical-free solution.
6. Diluted White Vinegar Solution
Vinegar is a natural acid that creates an environment where fungus struggles to survive.
- How to do it: Create a 50/50 solution of white vinegar and water. Lightly spray or wipe the interior of the shoes. Avoid oversaturating. Let them air dry completely, as the vinegar smell will dissipate.
- Best for: A natural cleaning approach. Test on a small area first to ensure it doesn’t damage the material.
7. Commercial Washers and Dryers (With Caution)
Some shoes are machine-washable, but this method requires care.
- How to do it: Remove laces and insoles. Place shoes in a mesh laundry bag. Use a gentle cycle with cold water and a mild detergent. Air dry completely; do not use a high-heat dryer as it can warp the shoes.
- Best for: Canvas, cotton, and synthetic shoes labeled as machine-washable. Never use on leather, suede, or dress shoes.
Comparison of Shoe Disinfection Methods
The best method for you depends on your shoes, the severity of the problem, and your budget. Here’s a quick comparison:
| Method | Cost | Effectiveness | Best For | Key Consideration |
|---|---|---|---|---|
| Sunlight & Air | Free | Moderate | Routine maintenance, mild odors | Weather-dependent; can fade colors. |
| Rubbing Alcohol | Low | High | Quick, regular disinfection | Evaporates quickly; may dry out leather. |
| Baking Soda/Powder | Low | Moderate (for odor) | Daily moisture & odor control | A preventative measure, not a deep clean. |
| Freezing | Free | Moderate to High | Delicate, non-washable shoes | Requires 24-48 hours; effectiveness debated. |
| UV Shoe Sanitizer | High | High | Tech users, recurrent infections | Initial investment cost; very convenient. |
| White Vinegar | Low | Moderate | Natural cleaning solution | Smell dissipates upon drying. |
| Washing Machine | Low | High | Machine-washable materials only | High risk of damaging non-washable shoes. |
Prevention: The Best Cure for Shoe Fungus
Once you’ve disinfected your shoes, keep them fungus-free with these habits:
- Rotate Your Shoes: Don’t wear the same pair two days in a row. This gives them at least 24 hours to fully dry out.
- Use Moisture-Wicking Socks: Wear socks made of natural fibers like wool or bamboo, or synthetic materials like polyester, which pull moisture away from the skin.
- Dry Shoes Thoroughly: If shoes get wet, stuff them with newspaper or use a dedicated shoe dryer to absorb moisture quickly.
- Wear Protective Footwear: Always wear flip-flops or shower shoes in public locker rooms, pools, and gym showers.
- Treat Your Feet: If you have an active infection, treat your feet with antifungal medication simultaneously with disinfecting your shoes.
Conclusion: Consistency is Key
Successfully disinfecting shoes from fungus requires a multi-pronged attack. For best results, combine a powerful initial disinfection method (like UV light or disinfectant spray) with daily preventative measures (like antifungal powder and proper rotation). By integrating these practices into your routine, you can banish unpleasant odors, stop the cycle of reinfection, and step forward with confidence in your clean, healthy footwear.

